BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007A04LP1|AL425618
(738 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1461 1321 0.0
3x_Contig1530 929 0.0
>3x_Contig1461
Length = 5478
Score = 1321 bits (665), Expect = 0.0
Identities = 723/735 (98%), Gaps = 6/735 (0%)
Strand = Plus / Minus
Query: 2 ctcggcaccttacgagaaatcaaagtctttgggttctggggggagtatggtcgcaaggct 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 969 ctcggcaccttacgagaaatcaaagtctttgggttctggggggagtatggtcgcaaggct 910
Query: 62 gaaacttaaaggaattgacggaagggcaccaccaggagtggagcctgcggcttaatttga 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 909 gaaacttaaaggaattgacggaagggcaccaccaggagtggagcctgcggcttaatttga 850
Query: 122 ctcaacacggggaaactcaccaggtccagacacaataaggattgacagattgagagctct 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 ctcaacacggggaaactcaccaggtccagacacaataaggattgacagattgagagctct 790
Query: 182 ttcttgattttgtgggtggtggtgcatggccgttcttagttggtggagtgatttgtctgc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 ttcttgattttgtgggtggtggtgcatggccgttcttagttggtggagtgatttgtctgc 730
Query: 242 ttaattgcgataacgaacgagaccttaacctactaaatagggttgctggcacttgccggt 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 ttaattgcgataacgaacgagaccttaacctactaaatagggttgctggcacttgccggt 670
Query: 302 tgactcttcttagag-ggactatcggtttcaag-ccgatg-gaagtttgaggcaataaca 358
||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 669 tgactcttcttagagaggactatcggtttcaagaccgatgagaagtttgaggcaataaca 610
Query: 359 ggtctgtgatgcccttagacgttctgggccgcacgcgcgctacactgacggagccagcga 418
|||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct: 609 ggtctgtgatgcccttagacgttctgggccgcacgcacgctactgtgacggagccagcga 550
Query: 419 gtacaaccttggccgagaggtctgggtaatcttgtgaaactccgtcgtgctggggataga 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 gtacaaccttggccgagaggtctgggtaatcttgtgaaactccgtcgtgctggggataga 490
Query: 479 gcattgtaattattgctcttcaacgaggaattcctagtaagcgcaagttatcagcttgcg 538
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 489 gcattgtaattattgctcttcaacgaggaattcctagtaagcgcaagtcatcagcttgcg 430
Query: 539 ttgattacgtccctgccctttgtacacaccgcccgtcgctagtaccgattgaatggctta 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ttgattacgtccctgccctttgtacacaccgcccgtcgctagtaccgattgaatggctta 370
Query: 599 gtgaggcctcaggatttgcttagagaagggggcaactccatctcagagcgaagaatctgg 658
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 369 gtgaggcctcaggatttgcttagggaagggggcaactccatctcagagcgaagaatctgg 310
Query: 659 tcaaa-mttggtcatttagaggaactaaaagtcgtaacaaggtttccgtagttgaacctg 717
||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 309 tcaaacattggtcatttagaggaactaaaagtcgtaacaaggtttccgtag-tgaacctg 251
Query: 718 cggaaggatcattaa 732
||| |||||||||||
Sbjct: 250 cgg-aggatcattaa 237
>3x_Contig1530
Length = 6216
Score = 929 bits (468), Expect = 0.0
Identities = 672/738 (91%), Gaps = 2/738 (0%)
Strand = Plus / Plus
Query: 2 ctcggcaccttacgagaaatcaaagtctttgggttctggggggagtatggtcgcaaggct 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 ctcggcaccttacgagaaatcaaagtctttgggttctggggggagtatggtcgcaaggct 768
Query: 62 gaaa-cttaaaggaattgacggaagggcaccaccaggagtggagcctgcggcttaatttg 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 gaaaacttaaaggaattgacggaagggcaccaccaggagtggagcctgcggcttaatttg 828
Query: 121 actcaacacggggaaactcaccaggtccagacacaataaggattgacagattgagagctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 actcaacacggggaaactcaccaggtccagacacaataaggattgacagattgagagctc 888
Query: 181 tttcttgattttgtgggtggtggtgcatggccgttcttagttggtggagtgatttgtctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 889 tttcttgattttgtgggtggtggtgcatggccgttcttagttggtggagtgatttgtctg 948
Query: 241 cttaattgcgataacgaacgagaccttaacctactaaatagggttgctggcacttgccgg 300
|||||||||||||||||||||||||||||||||||||||| |||||| |||||| || |
Sbjct: 949 cttaattgcgataacgaacgagaccttaacctactaaataaagttgctagcacttcccag 1008
Query: 301 ttgactcttcttagagggactatcggtttcaagccgatggaagtttgaggcaataacagg 360
|| |||||||||| | |||||| ||||||||| || || ||| | |||||||||
Sbjct: 1009 ttaactcttcttaaaaatactatcattttcaagccaataaaattttaaagcaataacaca 1068
Query: 361 tctgtgatgcccttagacgttctgggccgcacgcgcgctacactgacggagccagcgagt 420
||| | ||||||||| |||||||| ||| ||||||||||||||| || |||||||| |||
Sbjct: 1069 tctataatgcccttaaacgttctgtgccccacgcgcgctacactaacagagccagcaagt 1128
Query: 421 acaaccttggccgagaggtctgggtaatcttgtgaaactccgtcgtgctggggatagagc 480
|||||||| ||| | | ||| ||||||| | ||||||| |||||||| |||||||
Sbjct: 1129 acaaccttagccaaaaattctatttaatcttttaaaactccttcgtgctgaaaatagagc 1188
Query: 481 attgtaattattgctcttcaacgaggaattcctagtaagcgcaagttatcagcttgcgtt 540
|||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||
Sbjct: 1189 attgtaattattgctcttcaacgaggaattcctagtaagcgcaattcatcagcttgcttt 1248
Query: 541 gattacgtccctgccctttgtacacaccgcccgtcgctagtaccgattgaatggcttagt 600
||||| ||||| |||||| |||||||||||| |||||| |||| ||| ||| ||||| |
Sbjct: 1249 tattacttcccttccctttttacacaccgcccttcgctattacctatttaatcgcttatt 1308
Query: 601 gaggcctcaggatttgcttagagaagggggcaactccatctcagagcgaagaatctggtc 660
|| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1309 gacgcctcactatttgcttagagaagggggcaactccatctcagagcgaaaaatctggtc 1368
Query: 661 aaamttggtcatttagaggaactaaaagtcgtaacaaggtttccgtagttgaacctgcgg 720
||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 1369 aaacttggtcatttagaggaactaaaattcgtaacaaggtttccgtag-tgaacctgcgg 1427
Query: 721 aaggatcattaaagatta 738
|| ||||||||| ||||
Sbjct: 1428 aactatcattaaatatta 1445
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2994
Number of Sequences: 1807
Number of extensions: 2994
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 2
length of query: 738
length of database: 10,358,551
effective HSP length: 16
effective length of query: 722
effective length of database: 10,329,639
effective search space: 7457999358
effective search space used: 7457999358
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)